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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015949512.1_cds_XP_016490372.1_80799
CDS Infomation

[gene=LOC107810147] [db_xref=GeneID:107810147] [protein=transcription factor bHLH112-like] [protein_id=XP_016490372.1] [location=complement(join(9546..9695,10053..10103,10198..10263,10370..10435,10559..10666,10942..11560,11827..12134))] [gbkey=CDS]
Sequence

ATGGCTGATGAATTTCAAGCAGGAGTTTGTGGAGGAAACTGGTGGAATTCAAGTAGAAGT
ATTTTTGGTTCATCACTATGTGCAGCATCTTCTATAGGAAACAACTTTGCATGGCCAAAT
AATGACTTGTTGGATATGAAATCCTCCTGTAGGTCTAATGATGAATCTGGTAATTCTGAT
GATTCTGTGGTTCTTCAAGAATTACCCAAACATCATCAGCAACCTCATGACTCAACTTTA
CAAATGTTGGGTATTGGCCTTTCTTCATCATCAATTTCTTCAACTCCTGATTGGAATCAT
ACCATGATGCATGGAAATGAGAGGGCTGATAGCAGTTATCCTACAATACTACAAGAAGAC
CTAAATTCAAGCCTGAATTACAGGCAAGAAACTGGGGTTGATTGTTCTCATGAGCTGGGA
AAGAATTTTTCTACTATAACTGAAGATTCTTCAAACAACTCATATAAACAAGTGAATCAT
CAAGATTTTACTTTAGGCATGAATCCAATCACTAGCTCAACTAATACTGATCAATCCACT
GTGATTTCTTCAAGCTTTCCAATGAATTCTTCTTTTTCTAATTATCCATCAGCTTTACTT
CAGACCTTATTTGATAATGATCCTCCTCCTCATCAACAGCAACCACAACAACAATCTTTG
TTTACTAATAATAATCAGCCAATGAATTTCCCAGTATCCTTAAACTATAGGCCAAATTTG
AATGATCACTTTTCACCTTCTTTGCCTAAATTCCCACCCTTGTTGAGGCCTTCTTTACCA
AAACAAACACCTTCTAGTTTTCCTTTCACTGATCCCACATCCTTAAACAATATGCGCGGC
AATCTTTTGCCATCTATGCATTCACAATTGCTACTGCAGTCACCAACATTTCACGAGAAA
TCCAGTGTTCCTAACAATTCTGCCAAGTCGGATGTTGAAGGATTCCGAGAGTCGAGGGCT
AAGAAAAGTGGGAATAGTGAACCAGCATTCAAGAGGCCAAGAATGGAGACACCATCACCA
TTGCCAACTTTTAAGGTCAGAAAAGAGAAACTGGGGGACCGGATAACTGCTATCCAGCAA
TTGGTTTCACCTTTCGGAAAGACTGATACAGCTTCAGTTCTCCATGAAGCTATTGAGTAC
ATCAAGTTTCTCCATGATCAAGTCAACGTTCTTAGTACTCCGTATTTGAAAACTGGATCA
CCCCCTCTACACCAACAGAGTGCTGATAAGGTTAAGGAACAAGAAGGATCAAAACAAGAC
TTAAGGAGCCGAGGGCTGTGCCTAGTACCAATATCAAGTACTTTCCCTGTAGCAACTGAG
ACTACTACAGATTTCTGGACTCCAAATTTTGGTGGTACATTCAGATAA

Peptide Sequence

PEP ID

XP_016490372.1
PEP Infomation

PREDICTED: transcription factor bHLH112-like [Nicotiana tabacum]
Sequence

MADEFQAGVCGGNWWNSSRSIFGSSLCAASSIGNNFAWPNNDLLDMKSSCRSNDESGNSD
DSVVLQELPKHHQQPHDSTLQMLGIGLSSSSISSTPDWNHTMMHGNERADSSYPTILQED
LNSSLNYRQETGVDCSHELGKNFSTITEDSSNNSYKQVNHQDFTLGMNPITSSTNTDQST
VISSSFPMNSSFSNYPSALLQTLFDNDPPPHQQQPQQQSLFTNNNQPMNFPVSLNYRPNL
NDHFSPSLPKFPPLLRPSLPKQTPSSFPFTDPTSLNNMRGNLLPSMHSQLLLQSPTFHEK
SSVPNNSAKSDVEGFRESRAKKSGNSEPAFKRPRMETPSPLPTFKVRKEKLGDRITAIQQ
LVSPFGKTDTASVLHEAIEYIKFLHDQVNVLSTPYLKTGSPPLHQQSADKVKEQEGSKQD
LRSRGLCLVPISSTFPVATETTTDFWTPNFGGTFR

Transcript Sequence

Gene sequence data has not been registered.